BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004B10SP1|AL425231
(930 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1622 1778 0.0
>3x_Contig1622
Length = 13445
Score = 1778 bits (890), Expect = 0.0
Identities = 918/932 (98%), Gaps = 2/932 (0%)
Strand = Plus / Minus
Query: 1 atccgagatgttttcggaaccttgatctgttgttaaagattcttgttcagagaaatgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3509 atccgagatgttttcggaaccttgatctgttgttaaagattcttgttcagagaaatgttg 3450
Query: 61 atccggattatgtcctttttcatcgcttggtatttccttatcaaaagagttattgtttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3449 atccggattatgtcctttttcatcgcttggtatttccttatcaaaagagttattgtttga 3390
Query: 121 attcgatgaattagtatttctacggcttgtttgcgactgcmgttgacccattactggtcc 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3389 attcgatgaattagtatttctacggcttgtttgcgactgcagttgacccattactggtcc 3330
Query: 181 cgatccatcgttatatacattaaccggttggacttctagcgtcgaaggcgtgcgggcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3329 cgatccatcgttatatacattaaccggttggacttctagcgtcgaaggcgtgcgggcaga 3270
Query: 241 aagatgatcaamagtcaaaatactattttcactagatgaatgtcttttcaaaggctgctg 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3269 aagatgatcaaaagtcaaaatactattttcactagatgaatgtcttttcaaaggctgctg 3210
Query: 301 gttcttttgggatagttcagaattattagaatatccattattgtmaggkgaatyagtatt 360
|||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||
Sbjct: 3209 gttcttttgggatagttcagaattattagaatatccattattgtaaggtgaattagtatt 3150
Query: 361 catatcgagatcagagtcttgtaccttgaggacaggagatgataacggcgatcccaggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3149 catatcgagatcagagtcttgtaccttgaggacaggagatgataacggcgatcccaggtt 3090
Query: 421 caggtacatccyttgtccaatattatcaggmtcacyttttctccgaggtgtcaacaacag 480
||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 3089 caggtacatcctttgtccaatattatcaggatcactttttctccgaggtgtcaacaacag 3030
Query: 481 ttccgtgtcattgccttcccgaggctcatgcacagacaatctatttttgttagtctggtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3029 ttccgtgtcattgccttcccgaggctcatgcacagacaatctatttttgttagtctggtt 2970
Query: 541 agcagtaccattggttgtactgttcctaataccttcgttgtaaatytctttcgatggaga 600
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2969 agcagtaccattggttgtactgttcctaataccttcgttgtaaatttctttcgatggaga 2910
Query: 601 ggttgccttctcagaatcgttgcttagatcagagagttcatcaaggtcgggaattggttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2909 ggttgccttctcagaatcgttgcttagatcagagagttcatcaaggtcgggaattggttc 2850
Query: 661 tcgccagtaatttacgtcggtatacttctcatcattggctcgatagaatgatttttcatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2849 tcgccagtaatttacgtcggtatacttctcatcattggctcgatagaatgatttttcatc 2790
Query: 721 atgcattatgtttgttccatacggcgaacccggagttgttgaaatactccgagcatcttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2789 atgcattatgtttgttccatacggcgaacccggagttgttgaaatactccgagcatcttc 2730
Query: 781 agcgacaaatgggtactttttgacaggcgggaagaaatggtctacaagttcattaatatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2729 agcgacaaatgggtactttttgacaggcgggaagaaatggtctacaagttcattaatatg 2670
Query: 841 gatgtaggaacttttgtatccygctagctctagtaattccatatgtactt-cccmtcagg 899
||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||
Sbjct: 2669 gatgtaggaacttttgtatcctgctagctctagtaattccatatgtacttccccatcagg 2610
Query: 900 ggtgatagtg-aaatacgagaacttggaatac 930
| |||||||| |||||||||||||||||||||
Sbjct: 2609 gttgatagtgaaaatacgagaacttggaatac 2578
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5781
Number of Sequences: 1807
Number of extensions: 5781
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)